nah. in your Makefile, you should enable the following:
BUILD_GAME_SO = 1
and place it in your .tremulous/base folder, NOT .tremulous/base/vm. make sure you rm your QVM.
having all those maps might be causing some sort of error somewhere, as last time I tried to put all of the maps on a server, it wouldn't even start, because it exceeded the maximum amount of PK3s. Try removing some of them.